7AUB
Structure of P. aeruginosa PBP3 in complex with a benzoxaborole (Compound 15)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 69.256, 82.977, 89.089 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.719 - 1.907 |
Rwork | 0.199 |
R-free | 0.24560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hzr |
RMSD bond length | 0.009 |
RMSD bond angle | 1.541 |
Data reduction software | XDS (Jan 26, 2018) |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.719 | 1.940 |
High resolution limit [Å] | 1.907 | 1.907 |
Rmerge | 0.054 | 1.654 |
Rpim | 0.021 | 0.702 |
Number of reflections | 40602 | 2002 |
<I/σ(I)> | 16.7 | 0.9 |
Completeness [%] | 99.7 | 98.3 |
Redundancy | 7.2 | 6.4 |
CC(1/2) | 0.999 | 0.366 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 25% (w/v) polyethylene glycol 3,350, 0.1M Bis-Tris propane pH 6 and 1% (w/v) protamine sulphate |