7AMR
Crystal structure of the complex of the KFN mutant of Jovi-1 Fab with human TRBC1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-07 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9762 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 115.694, 91.011, 123.311 |
Unit cell angles | 90.00, 93.89, 90.00 |
Refinement procedure
Resolution | 43.590 - 1.949 |
R-factor | 0.1817 |
Rwork | 0.179 |
R-free | 0.22520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6*** |
RMSD bond length | 0.008 |
RMSD bond angle | 1.050 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | REFMAC |
Refinement software | BUSTER (2.11.7) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.700 | 2.130 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.125 | 1.018 |
Rpim | 0.056 | 0.509 |
Number of reflections | 49996 | 2500 |
<I/σ(I)> | 10.4 | 1.5 |
Completeness [%] | 53.7 | 11.6 |
Redundancy | 5.7 | |
CC(1/2) | 0.996 | 0.524 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | Equimolar amounts of A6 TCR C1 and Fab were mixed in PBS) to 10.8 mg/ml. 9% PEG 8000, 0.1M sodium cacodylate pH 6.6, 5 mM ZnCl2, 2% benzamidine HCl. Crystals from the complex with huJovi-1 Fab were used as seeds. |