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7AMQ

Crystal structure of the complex of HuJovi-1 Fab with the human TRBC2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-15
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameC 1 2 1
Unit cell lengths114.510, 91.792, 123.393
Unit cell angles90.00, 94.62, 90.00
Refinement procedure
Resolution47.840 - 2.353
R-factor0.2032
Rwork0.201
R-free0.24910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6***
RMSD bond length0.008
RMSD bond angle1.050
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.7)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.8402.430
High resolution limit [Å]2.3502.350
Rmerge0.1321.228
Number of reflections527464406
<I/σ(I)>8.31
Completeness [%]99.696.8
Redundancy5.14.3
CC(1/2)0.9960.712
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.4295Equimolar amounts of A6 TCR C2 and Fab were mixed in PBS to 10.4 mg/ml. 5% PEG 8000, 0.1M sodium cacodylate pH 7.4, 5 mM ZnCl2, 4% benzamidine HCl. Crystals from the Hu-Jovi1-TRBC1 complex were used as seeds.

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PDB entries from 2024-05-15

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