Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7AE7

Structure of Sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (ShVdcCD) in open form, with truncated ShVdcD (V59X)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]77
Detector technologyPIXEL
Collection date2018-05-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameP 21 21 21
Unit cell lengths101.553, 200.945, 201.991
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution71.420 - 2.660
R-factor0.1822
Rwork0.180
R-free0.22680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5m1c
RMSD bond length0.003
RMSD bond angle0.662
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]71.4302.755
High resolution limit [Å]2.6602.660
Number of reflections11931411673
<I/σ(I)>8.252.79
Completeness [%]99.8
Redundancy21.5
CC(1/2)0.9880.618
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7294JCSG-Plus B8 (0.2 M Magnesium chloride hexahydrate, 0.1 M Tris, pH7, 10% PEG 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon