7A3S
Crystal structure of dengue 3 virus envelope glycoprotein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2009-08-08 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 142.030, 142.030, 159.588 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.925 - 2.800 |
R-factor | 0.2353 |
Rwork | 0.233 |
R-free | 0.27390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1uzg |
RMSD bond length | 0.004 |
RMSD bond angle | 0.716 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.200 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.223 | 2.980 |
Number of reflections | 46309 | 4527 |
<I/σ(I)> | 9.2 | |
Completeness [%] | 100.0 | |
Redundancy | 8.3 | 6.7 |
CC(1/2) | 0.996 | 0.303 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 0.1 M HEPES (7.5), 1.5 M (NH4)2SO4, 280 mM NACL |