7A2V
Crystal structure of the Fyn SH3 domain L112V-S114N-S115T-E129Q at pH 4.0
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97910 |
Spacegroup name | P 61 |
Unit cell lengths | 45.542, 45.542, 58.595 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.720 - 1.810 |
R-factor | 0.2117 |
Rwork | 0.211 |
R-free | 0.21950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ua6 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2-3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.720 | 19.720 | 1.850 |
High resolution limit [Å] | 1.810 | 9.050 | 1.810 |
Rmerge | 0.119 | 0.070 | 0.916 |
Rmeas | 0.125 | 0.074 | 0.994 |
Rpim | 0.037 | 0.022 | 0.374 |
Total number of observations | 453 | 2345 | |
Number of reflections | 11188 | 42 | 344 |
<I/σ(I)> | 13.6 | 30.2 | 2.5 |
Completeness [%] | 92.9 | 75.9 | 94 |
Redundancy | 10.8 | 10.8 | 6.8 |
CC(1/2) | 0.998 | 0.999 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 298 | 1.5 M ammonium sulfate, 0.1 sodium acetate |