7A2P
Crystal structure of the Fyn SH3 domain L112V-S114N-S115T-E121L-R123H mutant at pH 5.0 with PEG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 29.312, 32.032, 59.893 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.530 - 0.900 |
R-factor | 0.1316 |
Rwork | 0.131 |
R-free | 0.14960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ua6 |
Data reduction software | XDS |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1-3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.960 | 19.960 | 0.920 |
High resolution limit [Å] | 0.900 | 4.930 | 0.900 |
Rmerge | 0.075 | 0.113 | 0.810 |
Rmeas | 0.077 | 0.117 | 0.895 |
Rpim | 0.017 | 0.028 | 0.364 |
Total number of observations | 5299 | 4969 | |
Number of reflections | 74252 | 311 | 924 |
<I/σ(I)> | 30.7 | 48.8 | 1.7 |
Completeness [%] | 92.2 | 97.9 | 44.7 |
Redundancy | 18.6 | 17 | 5.4 |
CC(1/2) | 0.996 | 0.994 | 0.724 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 298 | 5% PEG 300, 2.0 ammonium sulfate, 0.1M sodium acetate |