7A2J
Crystal structure of the Fyn SH3 domain in space group C21 at pH 7.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97879 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.011, 46.747, 42.818 |
Unit cell angles | 90.00, 97.84, 90.00 |
Refinement procedure
Resolution | 19.630 - 1.500 |
R-factor | 0.2138 |
Rwork | 0.212 |
R-free | 0.24660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ua6 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2-3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.630 | 19.630 | 1.530 |
High resolution limit [Å] | 1.500 | 8.220 | 1.500 |
Rmerge | 0.028 | 0.020 | 0.482 |
Rmeas | 0.033 | 0.024 | 0.571 |
Rpim | 0.018 | 0.013 | 0.303 |
Total number of observations | 455 | 3769 | |
Number of reflections | 22756 | 139 | 1101 |
<I/σ(I)> | 17.2 | 48.6 | 2.2 |
Completeness [%] | 99.2 | 91.9 | 98.4 |
Redundancy | 3.3 | 3.3 | 3.4 |
CC(1/2) | 0.999 | 0.999 | 0.931 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 4.5M sodium formate, 0.1M Hepes |