Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6D1A

Crystal structure of NDM-1 complexed with compound 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2016-12-06
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.00
Spacegroup nameP 1 21 1
Unit cell lengths41.780, 59.860, 42.020
Unit cell angles90.00, 97.78, 90.00
Refinement procedure
Resolution27.920 - 1.250
R-factor0.1488
Rwork0.147
R-free0.18100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tzf
Data reduction softwareiMOSFLM (7.2.1)
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHASER (2.8.0)
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]27.92027.9201.320
High resolution limit [Å]1.2503.9501.250
Rmerge0.0720.0400.944
Rmeas0.0840.0440.047
Rpim0.0430.0220.024
Number of reflections5607918488056
<I/σ(I)>8.5
Completeness [%]98.899.797.4
Redundancy3.83.83.7
CC(1/2)0.9970.9940.381
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.1550 mM Potassium phosphate monobasic, 10 mM Calcium chloride, 25% (w/v) PEG8000

218853

数据于2024-04-24公开中

PDB statisticsPDBj update infoContact PDBjnumon