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6BMG

Structure of Recombinant Dwarf Sperm Whale Myoglobin (Oxy)

Experimental procedure
実験手法SINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2016-12-16
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0332
Spacegroup nameP 41 21 2
格子定数 [Å]85.995, 85.995, 109.010
格子定数 [度]90.00, 90.00, 90.00
精密化法
残基29.286 - 1.880
R因子0.1558
Rwork0.154
R-free0.19030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2mbw
結合長の平均二乗偏差(RMSD) [Å]0.017
結合角の平均二乗偏差(RMSD) [度]1.299
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829: ???))
Quality characteristics
 OverallInner shellOuter shell
分解能 [Å] (低)29.29029.2901.920
分解能 [Å] (高)1.8809.0201.880
Rmerge_l_obs0.0980.0251.396
Rmeas0.1070.0271.518
Rpim0.0420.0110.590
Total number of observations218789
独立反射数339473702162
<I/σ(I)>14.5
完全性 [%]99.997.4100
冗長性6.45.66.5
CC(1/2)0.9990.9990.557
結晶化条件
結晶ID方法pH温度溶液条件
1VAPOR DIFFUSION, SITTING DROP7.52930.1 M sodium HEPES, pH 7.5, 1 M sodium acetate, 0.05 M cadmium sulfate 8/3-hydrate

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件を2024-09-18に公開中

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