6ZYR
Structure of IMP-1 with 2-Mercaptomethyl-thiazolidine L-anti-1b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-05 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.916 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.555, 78.003, 261.107 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 66.962 - 1.870 |
R-factor | 0.1847 |
Rwork | 0.183 |
R-free | 0.21870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5hh4 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.852 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.962 | 1.910 |
High resolution limit [Å] | 1.870 | 1.870 |
Rpim | 0.053 | 0.410 |
Number of reflections | 83296 | 4472 |
<I/σ(I)> | 9.4 | 2.1 |
Completeness [%] | 100.0 | |
Redundancy | 13 | |
CC(1/2) | 0.998 | 0.542 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.1 M sodium cacodylate pH 6.0, 0.2 M sodium acetate, 25% PEG 8000. 1ul protein (25 mg/ml) mixed with 1ul reagent |