6ZXZ
Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-02-12 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.00 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 62.412, 75.267, 52.981 |
| Unit cell angles | 90.00, 105.60, 90.00 |
Refinement procedure
| Resolution | 46.970 - 2.440 |
| R-factor | 0.212 |
| Rwork | 0.211 |
| R-free | 0.23200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3dvz |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.531 |
| Data reduction software | XDS (31 Jan 2020) |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.590 |
| High resolution limit [Å] | 2.440 | 2.440 |
| Number of reflections | 17179 | 2748 |
| <I/σ(I)> | 6.23 | |
| Completeness [%] | 99.5 | |
| Redundancy | 3.5 | |
| CC(1/2) | 0.990 | 0.359 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | RNA 1 volume Buffer (NaCl 80 mM, KCl 12 mM, MgCl2 20 mM, NaCaco pH7.0 40 mM, MPD 35 %, spermine tetrahydrochloride 12 mM) 1 volume |






