6ZW9
[4Fe-4S]-dependent thiouracil desulfidase TudS (DUF523Vcz) soaked with 4-thiouracil (S-SAD data)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.90745 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 136.165, 85.519, 39.576 |
Unit cell angles | 90.00, 94.01, 90.00 |
Refinement procedure
Resolution | 24.120 - 1.759 |
R-factor | 0.1689 |
Rwork | 0.168 |
R-free | 0.18850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6z92 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.910 |
Data reduction software | XDS (Mar 15,2019 (BUILT 20190806)) |
Data scaling software | STARANISO (2.2.19) |
Phasing software | BUSTER (2.10.3) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.760 | 1.840 |
High resolution limit [Å] | 1.759 | 1.760 |
Rmerge | 0.081 | 0.253 |
Rmeas | 0.086 | 0.283 |
Number of reflections | 39587 | 1978 |
<I/σ(I)> | 18.9 | |
Completeness [%] | 91.2 | 40.4 |
Redundancy | 9.6 | 4.6 |
CC(1/2) | 0.997 | 0.955 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 5.5 | 293 | Anaeroby, 10 mM MgCl2, 0.1 M MES, pH 5.5, 7-9% PEG 6000 |