6ZRC
Structure of the human RBAP48 in complex with a macrocyclic peptide cyclized via a xylene linker attached to two cysteines
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.99998 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 71.960, 96.325, 149.300 |
Unit cell angles | 90.00, 90.01, 90.00 |
Refinement procedure
Resolution | 48.160 - 2.600 |
R-factor | 0.2642 |
Rwork | 0.263 |
R-free | 0.29280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4pbz |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18rc7_3834) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.160 | 48.160 | 2.670 |
High resolution limit [Å] | 2.600 | 11.630 | 2.600 |
Rmerge | 0.111 | 0.029 | 1.264 |
Rmeas | 0.120 | 0.032 | 1.366 |
Total number of observations | 212828 | ||
Number of reflections | 31297 | 370 | 2303 |
<I/σ(I)> | 9.91 | 44.9 | 1.11 |
Completeness [%] | 99.5 | 98.4 | 99.8 |
Redundancy | 6.8 | 6.235 | 7.016 |
CC(1/2) | 0.999 | 0.999 | 0.828 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.1 | 293 | 20% PEG3350 0.15M DL-malic acid pH 7.1 |