6ZMZ
UDPG-bound Trehalose transferase from Thermoproteus uzoniensis
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976200 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.045, 69.327, 98.912 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.771 - 1.900 |
Rwork | 0.185 |
R-free | 0.22270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Apo-Tret |
RMSD bond length | 0.006 |
RMSD bond angle | 1.351 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 98.900 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.065 | 1.337 |
Rmeas | 0.077 | 1.580 |
Rpim | 0.041 | 0.836 |
Number of reflections | 29213 | 1838 |
<I/σ(I)> | 14.6 | 1.3 |
Completeness [%] | 99.3 | 98.5 |
Redundancy | 6.5 | 6.7 |
CC(1/2) | 0.999 | 0.508 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 292 | Bis-Tris Propane, PEG 3350, potassium thiocyanate, PEG 400 |