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6ZLD

Crystal Structure of UDP-Glucuronic acid 4-epimerase from Bacillus cereus in complex with UDP-Glucuronic acid and NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-29
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameP 1
Unit cell lengths42.364, 58.446, 64.734
Unit cell angles96.80, 98.36, 110.62
Refinement procedure
Resolution45.220 - 1.800
R-factor0.1698
Rwork0.168
R-free0.20750
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5u4q
RMSD bond length0.009
RMSD bond angle1.578
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.2201.840
High resolution limit [Å]1.8001.800
Number of reflections490953399
<I/σ(I)>9.3
Completeness [%]95.0
Redundancy1.6
CC(1/2)0.9900.780
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8293200 mM potassium acetate and 14-24% PEG3350, 2 mM UDP-glucuronic acid, 2 mM NAD+

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PDB entries from 2024-05-15

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