6Z7M
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 (3R,4R)-N-cyclohexyl-4-((3-methyl-2-oxo-1,2-dihydro-1,7-naphthyridin-8-yl)amino)piperidine-3-carboxamide
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-04-19 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9200 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.430, 48.980, 61.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 16.657 - 1.260 |
Rwork | 0.196 |
R-free | 0.21380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | in house structure |
RMSD bond length | 0.003 |
RMSD bond angle | 1.159 |
Data reduction software | XDS |
Data scaling software | Aimless |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 16.660 | 1.290 |
High resolution limit [Å] | 1.260 | 1.260 |
Rmerge | 0.043 | 0.551 |
Number of reflections | 35636 | 2463 |
<I/σ(I)> | 27.4 | 2.5 |
Completeness [%] | 99.1 | 95.5 |
Redundancy | 6.2 | |
CC(1/2) | 0.999 | 0.818 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1M Hepes pH 7.0, 5% MgCl2, 20% PEG6K |