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6YYU

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with manganese and 2-oxoglutarate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-01
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97623
Spacegroup nameP 21 21 21
Unit cell lengths48.791, 70.003, 170.870
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution85.440 - 2.110
R-factor0.2039
Rwork0.202
R-free0.23130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jza
RMSD bond length0.017
RMSD bond angle1.619
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]85.4402.420
High resolution limit [Å]2.1102.110
Rmerge0.1851.746
Number of reflections204591024
<I/σ(I)>111.6
Completeness [%]90.856.2
Redundancy13.2
CC(1/2)0.9970.509
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5277100 mM HEPES sodium, 10% v/v 2-Propanol, 20% w/v PEG 4000, 1 mM manganese chloride, 2 mM 2-oxoglutarate, 18 mg/ml protein

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