6YY3
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, t=0 diferrous state prior to oxygen activation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | PAL-XFEL BEAMLINE NCI |
Synchrotron site | PAL-XFEL |
Beamline | NCI |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2019-10-15 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 1.318066 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 106.041, 106.041, 301.029 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.660 - 2.000 |
R-factor | 0.2041 |
Rwork | 0.204 |
R-free | 0.23370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6yd0 |
Data reduction software | cctbx.xfel |
Data scaling software | cxi.merge |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.660 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Number of reflections | 116482 | 11408 |
<I/σ(I)> | 1.994 | |
Completeness [%] | 99.1 | 92.35 |
Redundancy | 81.9 | |
CC(1/2) | 0.933 | 0.270 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 30 mM Sodium-Iodide, 30 mM Sodium-Bromide, 30 mM Sodium-Fluoride, 20% (v/v) Glycerol, 10% (w/v) PEG 4000, 100 mM Hepes/MOPS pH 7.5 10 mM Iron(III) chloride |