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6YWJ

Arabidopsis aspartate transcarbamoylase mutant F161A complex with UMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2019-01-31
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97926
Spacegroup nameP 63
Unit cell lengths104.343, 104.343, 127.845
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.304 - 2.400
Rwork0.138
R-free0.19030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ypo
RMSD bond length0.011
RMSD bond angle1.784
Data reduction softwareautoPROC
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.3042.490
High resolution limit [Å]2.4002.400
Rmerge0.1941.255
Number of reflections309173526
<I/σ(I)>8.52
Completeness [%]100.0
Redundancy10
CC(1/2)0.9920.629
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION293Protein at 5 mg/ml in buffer 20 mM Tris pH 7.0, 0.1 M NaCl, 2% glycerol, 0.2 mM tris(2-carboxyethyl) phosphine (TCEP) and with 5 mM UMP. Crystallization solution: 18-22 % PEG3350, 0.1 M Na2SO4 and 0.1 M bis-tris pH 6.5 Crystals were cryo-protected by soaking in a solution containing the mother liquor supplemented with 20% glycerol and the 5 mM UMP.

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PDB entries from 2024-05-15

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