6YWJ
Arabidopsis aspartate transcarbamoylase mutant F161A complex with UMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-31 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97926 |
Spacegroup name | P 63 |
Unit cell lengths | 104.343, 104.343, 127.845 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.304 - 2.400 |
Rwork | 0.138 |
R-free | 0.19030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ypo |
RMSD bond length | 0.011 |
RMSD bond angle | 1.784 |
Data reduction software | autoPROC |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.304 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.194 | 1.255 |
Number of reflections | 30917 | 3526 |
<I/σ(I)> | 8.5 | 2 |
Completeness [%] | 100.0 | |
Redundancy | 10 | |
CC(1/2) | 0.992 | 0.629 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | Protein at 5 mg/ml in buffer 20 mM Tris pH 7.0, 0.1 M NaCl, 2% glycerol, 0.2 mM tris(2-carboxyethyl) phosphine (TCEP) and with 5 mM UMP. Crystallization solution: 18-22 % PEG3350, 0.1 M Na2SO4 and 0.1 M bis-tris pH 6.5 Crystals were cryo-protected by soaking in a solution containing the mother liquor supplemented with 20% glycerol and the 5 mM UMP. |