6YHM
Crystal structure of the C-terminal domain of CNFy from Yersinia pseudotuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-05-23 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.91841 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.981, 50.160, 69.728 |
Unit cell angles | 90.00, 98.72, 90.00 |
Refinement procedure
Resolution | 31.970 - 1.130 |
R-factor | 0.1683 |
Rwork | 0.167 |
R-free | 0.18520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hq0 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.928 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18rc4_3812) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 68.920 | 68.920 | 1.200 |
High resolution limit [Å] | 1.130 | 3.590 | 1.130 |
Rmerge | 0.036 | 0.021 | 0.405 |
Rmeas | 0.043 | 0.026 | 0.490 |
Rpim | 0.024 | 0.015 | 0.272 |
Total number of observations | 303327 | ||
Number of reflections | 100708 | 2464 | 15327 |
<I/σ(I)> | 16 | ||
Completeness [%] | 95.3 | 71.6 | 99.7 |
Redundancy | 3 | 2.7 | 2.9 |
CC(1/2) | 0.999 | 0.998 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.2 M ammonium fluoride, 20 % (w/v) PEG 3350 |