6YHL
Crystal structure of CNFy from Yersinia pseudotuberculosis - N-terminal fragment comprising residues 1-704
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-08-27 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.425, 99.896, 131.357 |
Unit cell angles | 90.00, 95.86, 90.00 |
Refinement procedure
Resolution | 54.679 - 3.277 |
R-factor | 0.2417 |
Rwork | 0.240 |
R-free | 0.26460 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | AutoSol |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 99.900 | 99.900 | 3.450 |
High resolution limit [Å] | 3.277 | 10.360 | 3.280 |
Rmerge | 0.088 | 0.022 | 0.793 |
Rmeas | 0.095 | 0.023 | 0.856 |
Rpim | 0.036 | 0.009 | 0.319 |
Number of reflections | 37569 | 1246 | 5459 |
<I/σ(I)> | 17.8 | ||
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 6.9 | 7.1 | 7.1 |
CC(1/2) | 0.999 | 1.000 | 0.802 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.2 M ammonium acetate, 28-32 % (w/v) PEG 4000, 0.1 M tri-sodium citrate pH 5.9 - 6.2 | |
2 | VAPOR DIFFUSION | 293 | 19-20 % ammonium sulfate, 19-21 % (w/v) PEG 5000 MME, 0.1 M Tis/HCl pH 7.3-7.9 |