6YHK
Crystal structure of full-length CNFy (C866S) from Yersinia pseudotuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-28 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00 |
Spacegroup name | I 21 21 21 |
Unit cell lengths | 70.153, 180.416, 220.761 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.078 - 2.700 |
R-factor | 0.2067 |
Rwork | 0.205 |
R-free | 0.24190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Models of N-terminal and C-terminal domains |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14rc1_3177) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.080 | 47.080 | 2.820 |
High resolution limit [Å] | 2.700 | 9.350 | 2.700 |
Rmerge | 0.106 | 0.028 | 1.805 |
Rmeas | 0.108 | 0.028 | 1.847 |
Rpim | 0.023 | 0.006 | 0.392 |
Total number of observations | 835740 | ||
Number of reflections | 38996 | 1041 | 4698 |
<I/σ(I)> | 23.3 | ||
Completeness [%] | 99.9 | 99.3 | 99.5 |
Redundancy | 21.4 | 20.6 | 22 |
CC(1/2) | 1.000 | 1.000 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.1 | 293 | 1.4 M ammonium sulfate, 0.13 M lithium acetate, 0.1 M HEPES/NaOH pH 7.1 |