Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YFE

Virus-like particle of Beihai levi-like virus 19

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-01
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9184
Spacegroup nameP 21 21 2
Unit cell lengths298.111, 325.048, 346.016
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.392 - 3.794
R-factor0.2611
Rwork0.261
R-free0.26680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ms2
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareFFT
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.43149.4314.020
High resolution limit [Å]3.79011.1203.790
Rmerge0.3720.0581.495
Rmeas0.4400.0701.772
Total number of observations1102291
Number of reflections3232251292850207
<I/σ(I)>3.5515.60.77
Completeness [%]98.094.195.3
Redundancy3.412.9143.358
CC(1/2)0.9650.9950.243
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829366% MPD, 100 mM Tris-HCl pH 8.0

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon