6YB6
Thrombin in complex with D-Phe-Pro-3-chloro-1,3-dihydroxybenzylamide derivative (13c)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-04 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 70.436, 71.200, 72.316 |
Unit cell angles | 90.00, 100.20, 90.00 |
Refinement procedure
Resolution | 35.587 - 1.330 |
R-factor | 0.132 |
Rwork | 0.131 |
R-free | 0.15260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hd8 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.400 | 1.410 |
High resolution limit [Å] | 1.330 | 1.330 |
Number of reflections | 79740 | 12752 |
<I/σ(I)> | 11.44 | 2.12 |
Completeness [%] | 99.0 | 98.3 |
Redundancy | 3.4 | 3.1 |
CC(1/2) | 1.000 | 0.730 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 20mM sodium dihydrogen phosphate ph 7.5 350mM NaCl 27% PEG 8000 |