6YAV
Structure of FeSII (Shethna) protein from Azotobacter vinelandii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97626 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 134.240, 135.100, 37.090 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.300 - 1.650 |
R-factor | 0.1993 |
Rwork | 0.198 |
R-free | 0.22490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5frt |
RMSD bond length | 0.007 |
RMSD bond angle | 0.912 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18rc2_3794) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.480 | 1.680 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.047 | 1.311 |
Rmeas | 0.049 | 1.437 |
Rpim | 0.020 | 0.571 |
Number of reflections | 81140 | 3986 |
<I/σ(I)> | 17.5 | 1.3 |
Completeness [%] | 98.4 | 97.1 |
Redundancy | 6.6 | |
CC(1/2) | 0.999 | 0.478 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 290 | 0.1 M HEPES pH 8, 0.2 sodium citrate, and 22% PEG 3350 |