6Y9U
Crystal structure of PnrA from S. pneumoniae in complex with adenosine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979240 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 78.221, 304.958, 128.556 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.060 - 2.500 |
Rwork | 0.190 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fqw |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (7.0.078) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.060 | 2.560 |
High resolution limit [Å] | 2.500 | 2.500 |
Rpim | 0.040 | 0.360 |
Number of reflections | 50919 | 3737 |
<I/σ(I)> | 13.6 | 2.2 |
Completeness [%] | 99.9 | |
Redundancy | 11.3 | |
CC(1/2) | 0.990 | 0.740 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 28% PEG 600, 0.2 M calcium acetate and 0.1 M sodium cacodylate (pH 6.5) |