6Y5S
Crystal structure of savinase at cryogenic conditions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91474 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.078, 62.028, 74.951 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.500 - 0.950 |
R-factor | 0.1415 |
Rwork | 0.141 |
R-free | 0.15490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4cfy |
RMSD bond length | 0.005 |
RMSD bond angle | 0.925 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.080 | 0.960 |
High resolution limit [Å] | 0.950 | 0.950 |
Rmerge | 0.073 | |
Number of reflections | 135716 | 7688 |
<I/σ(I)> | 13.7 | |
Completeness [%] | 98.0 | |
Redundancy | 6.7 | |
CC(1/2) | 0.998 | 0.605 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 298 | 0.2 M NaBr, 0.1 M Bis Tris propane, 20% PEG3350 |