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6Y3A

Structure of Plasmodium vivax phosphoglycerate kinase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-10-20
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.92818
Spacegroup nameP 21 21 21
Unit cell lengths42.340, 84.120, 125.520
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution69.879 - 1.490
R-factor0.1648
Rwork0.163
R-free0.19530
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ltk
Data reduction softwarexia2
Data scaling softwareAimless (0.5.15)
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]69.88069.8801.530
High resolution limit [Å]1.4906.6601.490
Rmerge0.0620.0341.141
Rmeas0.0680.0381.311
Rpim0.0270.0150.633
Total number of observations428316
Number of reflections741039575398
<I/σ(I)>14
Completeness [%]99.899.299.5
Redundancy5.85.54.1
CC(1/2)0.9990.9980.508
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.429120% PEG-MME 2K, 0.15 M KBr

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