6Y2R
Escherichia coli R255A RnlA endoribonuclease (single alanine mutant of RnlA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-18 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.980114 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.230, 104.930, 152.940 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.850 - 3.890 |
R-factor | 0.215 |
Rwork | 0.211 |
R-free | 0.30090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4i8o |
RMSD bond length | 0.004 |
RMSD bond angle | 0.693 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.850 | 4.030 |
High resolution limit [Å] | 3.890 | 3.890 |
Rmerge | 2.311 | |
Number of reflections | 9959 | 977 |
<I/σ(I)> | 4.44 | |
Completeness [%] | 99.6 | 98.29 |
Redundancy | 10.1 | |
CC(1/2) | 0.987 | 0.549 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Protein Buffer: 20 mM Tris HCl pH 8, 150 mM NaCl, 1 mM tris(2-carboxyethyl) phosphine. Reservoir solution: 100 mM Tris-HCl, pH 8.5, 8 % PEG 8000. |