6XYN
Crystal structure of a proteolytic fragment of NarQ comprising sensor and TM domains
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9724 |
Spacegroup name | I 4 |
Unit cell lengths | 51.283, 51.283, 182.988 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.380 - 2.300 |
R-factor | 0.2507 |
Rwork | 0.249 |
R-free | 0.28480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5iji |
RMSD bond length | 0.004 |
RMSD bond angle | 0.677 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.11) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.380 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.064 | 0.554 |
Rmeas | 0.073 | 0.632 |
Rpim | 0.035 | 0.299 |
Number of reflections | 10245 | 1015 |
<I/σ(I)> | 13.2 | |
Completeness [%] | 97.8 | 99.8 |
Redundancy | 4.3 | 4.4 |
CC(1/2) | 0.999 | 0.772 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 295 | 1 M KH2PO4/Na2HPO4 pH 5.2 and 5 mM NaNO3 |