6XW2
Crystal structure of the bright genetically encoded calcium indicator NCaMP7 based on mNeonGreen fluorescent protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | KURCHATOV SNC BEAMLINE K4.4 |
Synchrotron site | KURCHATOV SNC |
Beamline | K4.4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-05-30 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.79272 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.900, 65.700, 93.020 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.990 - 1.750 |
R-factor | 0.1647 |
Rwork | 0.163 |
R-free | 0.19330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5mwc |
RMSD bond length | 0.014 |
RMSD bond angle | 1.812 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.990 | 50.000 | 1.900 |
High resolution limit [Å] | 1.750 | 10.000 | 1.750 |
Rmerge | 0.158 | 0.027 | 0.842 |
Rmeas | 0.165 | 0.029 | 0.881 |
Total number of observations | 442254 | ||
Number of reflections | 38947 | 248 | 8372 |
<I/σ(I)> | 14.54 | 57.38 | 3.38 |
Completeness [%] | 100.0 | 97.6 | 100 |
Redundancy | 11.355 | 9.23 | 11.46 |
CC(1/2) | 0.998 | 1.000 | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M Sodium acetate pH 4.6; 0.2M Ammonium sulfate; 22% PEG 2000 MME |