6XUT
Crystallographic structure of oligosaccharide dehydrogenase from Pycnoporus cinnabarinus, ligand-free form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-28 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.874, 61.592, 195.091 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 97.550 - 1.600 |
R-factor | 0.16626 |
Rwork | 0.165 |
R-free | 0.19648 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ynt |
RMSD bond length | 0.013 |
RMSD bond angle | 1.713 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 97.740 | 1.570 |
High resolution limit [Å] | 1.430 | 1.430 |
Number of reflections | 103248 | 25836 |
<I/σ(I)> | 14.5 | 1.72 |
Completeness [%] | 99.9 | |
Redundancy | 12.7 | |
CC(1/2) | 1.000 | 0.790 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 2 M ammonium sulfate |