6XSP
Crystal structure of E.coli DsbA in complex with 2-(2,6-bis(3-methoxyphenyl)benzofuran-3-yl)acetic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-06 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.95370 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.080, 63.820, 74.370 |
Unit cell angles | 90.00, 125.73, 90.00 |
Refinement procedure
Resolution | 31.910 - 2.300 |
R-factor | 0.1946 |
Rwork | 0.192 |
R-free | 0.24590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fvk |
RMSD bond length | 0.009 |
RMSD bond angle | 0.956 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.910 | 31.910 | 2.380 |
High resolution limit [Å] | 2.300 | 8.910 | 2.300 |
Rmerge | 0.062 | 0.030 | 0.273 |
Rmeas | 0.072 | 0.036 | 0.314 |
Rpim | 0.035 | 0.019 | 0.154 |
Total number of observations | 80257 | 1227 | 8002 |
Number of reflections | 19927 | 354 | 1977 |
<I/σ(I)> | 13.8 | 27.8 | 4.6 |
Completeness [%] | 99.9 | 97 | 100 |
Redundancy | 4 | 3.5 | 4 |
CC(1/2) | 0.997 | 0.995 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 11-13% PEG 8000, 5-7.5% glycerol, 1 mM copper(II) chloride, 100 mM sodium cacodylate |