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6XQ9

Receptor for Advanced Glycation End Products VC1 domain in complex with Fragments 1 & 13

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2018-07-24
DetectorRAYONIX MX-300
Wavelength(s)0.97857
Spacegroup nameP 62
Unit cell lengths102.112, 102.112, 102.179
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.060 - 2.300
R-factor0.2159
Rwork0.215
R-free0.23880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4lp4
RMSD bond length0.009
RMSD bond angle1.327
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.380
High resolution limit [Å]2.3002.300
Rmeas0.0630.166
Rpim0.0190.050
Number of reflections528265258
<I/σ(I)>29.918.38
Completeness [%]99.798.43
Redundancy5.75.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2772.5 M NaOAc (pH 7.5)

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