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6XNF

GCN4-p1 Peptide Trimer with Tetrafluoroiodophenylalanine residue at position 16 (TFI-F16)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-003
Temperature [K]100
Detector technologyPIXEL
Collection date2017-08-08
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths59.650, 35.190, 47.020
Unit cell angles90.00, 100.65, 90.00
Refinement procedure
Resolution46.210 - 2.000
R-factor0.2002
Rwork0.197
R-free0.25370
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1swi
RMSD bond length0.008
RMSD bond angle1.070
Data reduction softwareHKL-2000
Data scaling softwareAimless
Phasing softwarePHENIX (1.16_3549)
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.2102.072
High resolution limit [Å]2.0002.000
Rmerge0.0980.758
Rmeas0.1070.338
Rpim0.0420.833
Number of reflections430813998
<I/σ(I)>11.382.69
Completeness [%]99.599.4
Redundancy6.56
CC(1/2)0.9960.766
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7298Crystallization drops were prepared by mixing 2 uL of stock peptide solution with 2 uL of mother liquor and allowed to equilibrate at 298 K over a well containing 500 uL of mother liquor. The stock peptide solution (total concentration 1.5 mM) was prepared by mixing 2:1 ratios of the A16 peptide with TFI-F16 in 10 mM potassium phosphate, 100 mM potassium chloride pH 7.0.

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PDB entries from 2024-05-15

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