6XNE
GCN4-p1 Peptide Trimer with p-methylphenylalanine residue at position 16 (me-F16)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-003 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-03-28 |
| Detector | DECTRIS PILATUS 200K |
| Wavelength(s) | 1.54 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 60.138, 34.891, 47.041 |
| Unit cell angles | 90.00, 100.63, 90.00 |
Refinement procedure
| Resolution | 20.100 - 1.960 |
| R-factor | 0.2247 |
| Rwork | 0.210 |
| R-free | 0.30860 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1swi |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.893 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.100 | 2.037 |
| High resolution limit [Å] | 1.960 | 1.966 |
| Rmerge | 0.051 | 0.329 |
| Rmeas | 0.072 | 0.465 |
| Rpim | 0.051 | 0.329 |
| Number of reflections | 13582 | 1201 |
| <I/σ(I)> | 19.02 | 3.26 |
| Completeness [%] | 99.5 | 97.68 |
| Redundancy | 2 | 1.8 |
| CC(1/2) | 0.992 | 0.623 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | Crystallization drops were prepared by mixing 2 uL of stock peptide solution with 2 uL of mother liquor and allowed to equilibrate at 298 K over a well containing 500 uL of mother liquor. The stock peptide solution (total concentration 1.5 mM) was prepared by mixing 2:1 ratios of the A16 peptide with me-F16 in 10 mM potassium phosphate, 100 mM potassium chloride pH 7.0. |






