6XKS
Crystal structure of domain A from the periplasmic Lysine-, Arginine-, Ornithine-binding protein (LAO) of Salmonella typhimurium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-26 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.597, 87.785, 109.154 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.860 - 2.400 |
R-factor | 0.2361 |
Rwork | 0.230 |
R-free | 0.28800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2lao |
RMSD bond length | 0.004 |
RMSD bond angle | 0.678 |
Data reduction software | CrystalClear |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.160 | 0.826 |
Number of reflections | 32910 | 1691 |
<I/σ(I)> | 16.6 | 2 |
Completeness [%] | 99.3 | 98.6 |
Redundancy | 6.7 | 4.7 |
CC(1/2) | 0.991 | 0.694 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291.15 | 0.2 M Sodium acetate trihydrate, 0.1 M Sodium cacodylate trihydrate pH 6.5, 30% w/v Polyethylene glycol 8,000 |