Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6XJJ

Structure of non-heme iron enzyme TropC: Radical tropolone biosynthesis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-17
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0332
Spacegroup nameP 31 2 1
Unit cell lengths111.014, 111.014, 89.889
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.070 - 2.700
R-factor0.2122
Rwork0.210
R-free0.25050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5c3q
RMSD bond length0.005
RMSD bond angle0.890
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.0702.873
High resolution limit [Å]2.7002.700
Rmerge0.0701.073
Rmeas0.0850.035
Rpim0.0340.720
Number of reflections170402288
<I/σ(I)>14.41.7
Completeness [%]95.497.7
Redundancy5.96
CC(1/2)0.9900.766
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.42770.2 M Magnesium acetate, 20% PEG 8000, 0.01 M Yttrium (III) chloride hexahydrate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon