6XJ6
Crystal structure of the helical cell shape determining protein Pgp2 from Campylobacter jejuni
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.451, 71.942, 91.691 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.971 - 1.497 |
R-factor | 0.1594 |
Rwork | 0.158 |
R-free | 0.19150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xzz |
RMSD bond length | 0.004 |
RMSD bond angle | 0.709 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (v1.12-2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.530 |
High resolution limit [Å] | 1.497 | 4.070 | 1.500 |
Rmerge | 0.037 | 0.019 | 0.581 |
Rmeas | 0.040 | 0.021 | 0.634 |
Rpim | 0.016 | 0.008 | 0.250 |
Number of reflections | 51069 | 2770 | 2513 |
<I/σ(I)> | 8 | ||
Completeness [%] | 99.5 | 99.2 | 99.5 |
Redundancy | 6.3 | 6.1 | 6.1 |
CC(1/2) | 0.999 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 20% (w/v) PEGMME 2000, 100 mM Tris pH 8.5, and 200 mM Tris-methylamine N-oxide dehydrate |