6XI9
X-ray crystal structure of MqnE from Pedobacter heparinus in complex with aminofutalosine and methionine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-D |
| Synchrotron site | APS |
| Beamline | 21-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-07-28 |
| Detector | DECTRIS EIGER2 X 9M |
| Wavelength(s) | 0.98393 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 72.512, 75.079, 83.269 |
| Unit cell angles | 90.00, 107.13, 90.00 |
Refinement procedure
| Resolution | 19.960 - 2.140 |
| R-factor | 0.1531 |
| Rwork | 0.151 |
| R-free | 0.19800 |
| Structure solution method | SAD |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.558 |
| Data reduction software | DENZO |
| Data scaling software | HKL-2000 |
| Phasing software | HKL2Map |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 20.000 | 20.000 | 2.180 |
| High resolution limit [Å] | 2.140 | 5.760 | 2.140 |
| Rmerge | 0.115 | 0.038 | 0.609 |
| Rmeas | 0.126 | 0.041 | 0.670 |
| Rpim | 0.050 | 0.016 | 0.272 |
| Total number of observations | 280095 | ||
| Number of reflections | 46050 | 2403 | 2316 |
| <I/σ(I)> | 4.6 | ||
| Completeness [%] | 97.1 | 98.1 | 98.7 |
| Redundancy | 6.1 | 6.8 | 5.9 |
| CC(1/2) | 0.999 | 0.791 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2 M K-Na-Tartrate, 20% polyethylene glycol 3,350 |






