6XI7
Crystal Structure of wild-type KRAS (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF (crystal form I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 91.890, 91.890, 154.110 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.950 - 1.950 |
R-factor | 0.2061 |
Rwork | 0.204 |
R-free | 0.23210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xhb |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.950 | 45.950 | 2.070 |
High resolution limit [Å] | 1.950 | 5.820 | 1.950 |
Rmerge | 0.047 | 0.023 | 1.093 |
Rmeas | 0.050 | 0.025 | 1.157 |
Total number of observations | 264233 | ||
Number of reflections | 28734 | 1247 | 4490 |
<I/σ(I)> | 24.2 | 70.95 | 2.14 |
Completeness [%] | 99.8 | 99.1 | 99.3 |
Redundancy | 9.196 | 7.694 | 9.416 |
CC(1/2) | 1.000 | 1.000 | 0.769 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.3 | 293 | 2218.18 mM AMSO4, 6.5% (w/v) PEG 400, pH 5.3 |