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6XI7

Crystal Structure of wild-type KRAS (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF (crystal form I)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-17
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9791
Spacegroup nameP 63 2 2
Unit cell lengths91.890, 91.890, 154.110
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.950 - 1.950
R-factor0.2061
Rwork0.204
R-free0.23210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6xhb
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.95045.9502.070
High resolution limit [Å]1.9505.8201.950
Rmerge0.0470.0231.093
Rmeas0.0500.0251.157
Total number of observations264233
Number of reflections2873412474490
<I/σ(I)>24.270.952.14
Completeness [%]99.899.199.3
Redundancy9.1967.6949.416
CC(1/2)1.0001.0000.769
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.32932218.18 mM AMSO4, 6.5% (w/v) PEG 400, pH 5.3

219869

PDB entries from 2024-05-15

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