6XH3
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9840 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 40.602, 40.602, 291.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.117 - 2.353 |
R-factor | 0.2158 |
Rwork | 0.213 |
R-free | 0.25280 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS (Mar 15, 2019) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHENIX (1.15.2_3472) |
Refinement software | PHENIX (1.15_3448) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.120 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rpim | 0.062 | 0.439 |
Number of reflections | 11000 | 961 |
<I/σ(I)> | 7.6 | 1.6 |
Completeness [%] | 98.9 | 91.5 |
Redundancy | 7.1 | 5.6 |
CC(1/2) | 0.975 | 0.595 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293.15 | 0.1 M Sodium cacodylate, 0.2 M Ammonium formate, 17.5% (w/v) PEG-3350 |