6X8Q
Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein PAPP peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.033170 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 59.349, 59.349, 233.542 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.620 - 1.600 |
R-factor | 0.1594 |
Rwork | 0.159 |
R-free | 0.18760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | internal |
RMSD bond length | 0.015 |
RMSD bond angle | 1.431 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 1.700 |
High resolution limit [Å] | 1.600 | 1.600 |
Number of reflections | 64371 | 10497 |
<I/σ(I)> | 16.3 | |
Completeness [%] | 99.9 | |
Redundancy | 18.8 | |
CC(1/2) | 0.999 | 0.680 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 20% (w/v) PEG 3350, 0.15 M malic acid pH 7 |