6X8L
Caspase-7 in complex with elongated ketomethylene inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 88.296, 88.296, 187.280 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.970 - 2.450 |
R-factor | 0.1807 |
Rwork | 0.179 |
R-free | 0.21530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jj8 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.490 |
High resolution limit [Å] | 2.447 | 6.650 | 2.450 |
Rmerge | 0.114 | 0.070 | 0.627 |
Rmeas | 0.138 | 0.086 | 0.767 |
Rpim | 0.076 | 0.049 | 0.436 |
Number of reflections | 49594 | 2568 | 2803 |
<I/σ(I)> | 10.3 | ||
Completeness [%] | 94.2 | 85.2 | 94.7 |
Redundancy | 2.9 | 2.8 | 2.8 |
CC(1/2) | 0.989 | 0.832 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 295 | 1:1 protein : 0.15 M sodium citrate, 1.45 M sodium formate |