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6X8A

Sucrose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]93
Detector technologyPIXEL
Collection date2015-09-19
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97934
Spacegroup nameP 21 21 21
Unit cell lengths45.230, 50.610, 79.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.710 - 1.060
R-factor0.1427
Rwork0.142
R-free0.16250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5j6y
RMSD bond length0.011
RMSD bond angle1.442
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.7101.090
High resolution limit [Å]1.0601.060
Rmeas0.106
Number of reflections616373876
<I/σ(I)>15.26
Completeness [%]74.6
Redundancy8.1
CC(1/2)0.279
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH72980.2 M calcium chloride, 0.1 M HEPES (pH 7), 20% (v/v) polyethylene glycol 3350 and ~30 % (w/v) sucrose

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PDB entries from 2024-05-15

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