6X7E
Co-bound structure of an engineered protein trimer, TriCyt3, with delta isomerism at the hexahistidine coordination site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.485500 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.090, 78.003, 50.189 |
Unit cell angles | 90.00, 106.48, 90.00 |
Refinement procedure
Resolution | 39.704 - 1.999 |
R-factor | 0.1659 |
Rwork | 0.162 |
R-free | 0.21270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bc5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.916 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.704 | 2.071 |
High resolution limit [Å] | 1.999 | 1.999 |
Rmerge | 0.042 | 0.093 |
Rmeas | 0.050 | 0.112 |
Rpim | 0.027 | 0.061 |
Number of reflections | 23245 | 2169 |
<I/σ(I)> | 23.76 | 9.79 |
Completeness [%] | 96.3 | 90.83 |
Redundancy | 3.4 | |
CC(1/2) | 0.998 | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 25% PEG1500, 200 mM MgCl2, 100 mM TRIS (8.5) |