6X0Q
A Circular Permutant of the Tobacco Mosaic Virus (TMV) mutant Q101H coordinated with heme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-20 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.1158 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 218.015, 176.136, 100.235 |
Unit cell angles | 90.00, 98.53, 90.00 |
Refinement procedure
Resolution | 49.560 - 3.000 |
R-factor | 0.257 |
Rwork | 0.257 |
R-free | 0.26510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3kml |
RMSD bond length | 0.002 |
RMSD bond angle | 0.501 |
Data reduction software | XDS |
Data scaling software | XDS |
Refinement software | PHENIX (1.15_3459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 136.400 | 3.060 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 74780 | 4612 |
<I/σ(I)> | 4.5 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.3 | 12.3 |
CC(1/2) | 0.983 | 0.317 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | The apoprotein crystals were obtained in 0.1 M SPG buffer (0.0125 M succinic acid, 0.0438 M sodium phosphate, 0.0437 M glycine), 12-18 % (v/v) PEG 1500, pH 5.0-5.5. The holoprotein crystals were obtained by transferring the apoprotein crystals into a soak-in buffer at the same pH as their mother liquor containing 0.1 M SPG buffer, 30%-40% (v/v) PEG 1500, 150-300 uM hemin (iron (III) protoporphyrin IX) |