6X05
Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 93.381, 154.693, 41.423 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.570 - 2.100 |
R-factor | 0.1765 |
Rwork | 0.174 |
R-free | 0.21880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4q9t |
RMSD bond length | 0.008 |
RMSD bond angle | 1.048 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.570 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rpim | 0.052 | 0.480 |
Number of reflections | 39093 | 3828 |
<I/σ(I)> | 19.3 | 1.48 |
Completeness [%] | 99.9 | |
Redundancy | 11.9 | |
CC(1/2) | 0.999 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 24% PEG 3,350, 0.2M Ammonium sulfate, 0.1M Bis-Tris pH 5.5 |