6WZS
Fusibacterium ulcerans ZTP riboswitch bound to m-1-pyridinyl AICA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.98395 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 90.284, 90.284, 121.391 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.950 - 3.230 |
R-factor | 0.2274 |
Rwork | 0.224 |
R-free | 0.25890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5btp |
RMSD bond length | 0.001 |
RMSD bond angle | 0.258 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.310 |
High resolution limit [Å] | 3.230 | 8.810 | 3.250 |
Rmerge | 0.088 | 0.033 | 2.574 |
Rmeas | 0.093 | 0.035 | 2.758 |
Rpim | 0.030 | 0.012 | 0.968 |
Number of reflections | 9567 | 544 | 471 |
<I/σ(I)> | 3.9 | ||
Completeness [%] | 100.0 | 100 | 99.4 |
Redundancy | 9.4 | 8.5 | 7.6 |
CC(1/2) | 1.000 | 0.173 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 294 | 26% (w/v) PEG 4000, 100 mM Tris HCl pH 8.5, 200 mM Lithium Sulfate |